PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.FG0DM
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 82aa    MW: 9142.4 Da    PI: 10.7697
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.FG0DMgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH291.9e-0920591554
                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +i +  ++L++l+P++ +++s K+s a +L++++ YIk L
  Araip.FG0DM 20 QITDLVSKLQQLIPQLRSTHSDKVSAAKVLQETCSYIKTL 59
                 7889999********879********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.039559IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-72059IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-82062IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.67E-72064IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    Send to blast
MSSRRSSSGA PTSAGMTDAQ ITDLVSKLQQ LIPQLRSTHS DKVSAAKVLQ ETCSYIKTLH  60
RERPIVPAFG QHRLKYRTSS HY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193693.16e-38PREDICTED: transcription factor PRE6-like
SwissprotQ8GW325e-19PRE6_ARATH; Transcription factor PRE6
TrEMBLA0A151RGX84e-24A0A151RGX8_CAJCA; Transcription factor bHLH135 family
STRINGGLYMA02G02250.16e-23(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56734143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-20bHLH family protein